LSF project codesΒΆ
To run any jobs on the HPC, you will need to use your project code.
You can see what queues are assigned to you using:
bugroup -w | grep <your_username> | awk '{print $1}'
These are the current LSF queues and project codes. Updated on 8th November 2023.
| GECIP domain or Discovery Forum | Project code |
|---|---|
| Breast cancer | re_gecip_cancer_breast |
| Childhood cancer | re_gecip_cancer_childhood |
| Colorectal cancer | re_gecip_cancer_colorectal |
| Glioma | re_gecip_cancer_glioma |
| Haematological malignancy | re_gecip_cancer_haem |
| Head and Neck Cancer | re_gecip_cancer_head_neck |
| Lung cancer | re_gecip_cancer_lung |
| Melanoma | re_gecip_cancer_melanoma |
| Neuroendocrine cancer | re_gecip_cancer_neuroendocrine |
| Ovarian cancer | re_gecip_cancer_ovarian |
| Pan-cancer | re_gecip_cancer_pan |
| Prostate cancer | re_gecip_cancer_prostate |
| Renal cell carcinoma | re_gecip_cancer_renal_cell |
| Sarcoma | re_gecip_cancer_sarcoma |
| Testicular cancer | re_gecip_cancer_testicular |
| Cancer of unknown primary | re_gecip_cancer_unknown_primary |
| Uppergastrointestinal cancer | re_gecip_cancer_upper_gi |
| Cardiovascular | re_gecip_cardiovascular |
| Endocrine and metabolism | re_gecip_endocrine_and_metabolism |
| Enhanced Interpretation | re_gecip_enhanced_interpretation |
| Ethics and social science | re_gecip_ethics_social_science |
| Functional crosscutting | re_gecip_functional_crosscutting |
| Functional effects | re_gecip_functional_effects |
| Non-malignant haematological and haemostasis disorders | re_gecip_haem_disorders |
| Health Economics | re_gecip_health_economics |
| Electronic health records | re_gecip_health_records |
| Hearing and sight | re_gecip_hearing_and_sight |
| Immune disorders | re_gecip_immune |
| Inherited cancer predisposition | re_gecip_inherited_cancer_predisposition |
| Quantitative methods, machine learning and functional genomics | re_gecip_machine_learning |
| Musculoskeletal | re_gecip_musculoskeletal |
| Neurology | re_gecip_neurology |
| Paediatrics | re_gecip_paediatrics |
| Population genomics | re_gecip_population_genomics |
| Renal | re_gecip_renal |
| Respiratory | re_gecip_respiratory |
| Skin | re_gecip_skin |
| Stratified medicine | re_gecip_stratified_medicine |
| Abbvie | re_df_abbvie_1 |
| Alexion | re_df_alexion |
| Alnylam | re_df_alnylam |
| Astellas | re_df_astellas |
| Astrazeneca | re_df_astrazeneca |
| Bayer | re_df_bayer |
| Berg_health | re_df_berg_health |
| Biogen | re_df_biogen |
| Biomarin | re_df_biomarin |
| Bioxplor | re_df_bioxplor |
| Bristol-Myers Squibb | re_df_bms |
| Cellworks | re_df_cellworks |
| Commercial | re_df_commercial |
| Congenica | re_df_congenica |
| Daiichi | re_df_daiichi |
| Dnastack | re_df_dnastack |
| Genomics_plc | re_df_genomics_plc |
| Gsk | re_df_gsk |
| Helomics | re_df_helomics |
| Hummingbird_bio | re_df_hummingbird_bio |
| Illumina | re_df_illumina |
| Integral | re_df_integral |
| Ionis | re_df_ionis |
| Iqvia | re_df_iqvia |
| Lifebit | re_df_lifebit |
| Macusoft | re_df_macusoft |
| Merck | re_df_merck |
| Msd | re_df_msd |
| Myneo | re_df_myneo |
| My personal therapeutics | re_df_my_personal_therapeutics |
| Novartis | re_df_novartis |
| ONT (Oxford Nanopore Technologies) | re_df_ONT |
| Pangea | re_df_pangea |
| Qiagen | re_df_qiagen |
| Rhythm | re_df_rhythm |
| Roche | re_df_roche |
| Roche Collaboration | re_df_roche_dw_collaboration |
| Serinusbio | re_df_serinusbio |
| Servier | re_df_servier |
| Silence_therapeutics | re_df_silence_therapeutics |
| Sysmex | re_df_sysmex |
| Takeda | re_df_takeda |
| The Hyve | re_df_the_hyve |
| UCB | re_df_ucb |