Whitelisted sites

For our participants' safety, we only allow you to export data using the Airlock. One way we do that is by blocking access to most of the internet within the RE.

The following websites are whitelisted and can be accessed from within the RE:

Website	Whitelisted urls	Homepage
ClinVar	www.ncbi.nlm.nih.gov/clinvar/*	www.ncbi.nlm.nih.gov/clinvar/
Consensus CDS Project	www.ncbi.nlm.nih.gov/CCDS/*	www.ncbi.nlm.nih.gov/CCDS/
COSMIC	cancer.sanger.ac.uk/cosmic/* cancer.sanger.ac.uk/_asset/* cancer.sanger.ac.uk/cancergenome/* cancer.sanger.ac.uk/javascripts/* cancer.sanger.ac.uk/cosmic/*	https://cancer.sanger.ac.uk/cosmic/
dbSNP	www.ncbi.nlm.nih.gov/snp/*	www.ncbi.nlm.nih.gov/snp/
DECIPHER	https://www.deciphergenomics.org/*	https://www.deciphergenomics.org/
EMBL EBI	www.ebi.ac.uk/* www.ebi.ac.uk/interpro/* www.ebi.ac.uk/wen_guidelines/*	www.ebi.ac.uk/
Ensembl BioMart	ensembl.org/biomart/martview/*	https://ensembl.org/biomart/martview
ExAC Browser beta	https://gnomad.broadinstitute.org/	https://gnomad.broadinstitute.org/
Genetics Home Reference Gene Browser	https://medlineplus.gov/genetics/* https://medlineplus.gov/genetics/gene/*	https://medlineplus.gov/genetics/gene/
gnomAD Browser beta	https://gnomad.broadinstitute.org	https://gnomad.broadinstitute.org
HUGO Gene Nomenclature Committee	www.genenames.org/* www.genenames.org/data/* www.genenames.org/sites/* www.genenames.org/css/* www.genenames.org/js/* rest.genenames.org/*	https://www.genenames.org/
Human Phenotype Ontology	www.human-phenotype-ontology.org/hpoweb/* www.human-phenotype-ontology.org/* human-phenotype-ontology.github.io/*
IGV Browser	igv.broadinstitute.org/* igvdata.broadinstitute.org/*
Local LabKey	labkey.embassy.local/*
NCBI Gene	www.ncbi.nlm.nih.gov/gene*	www.ncbi.nlm.nih.gov/gene
NCBI Nucleotide	www.ncbi.nlm.nih.gov/nuccore/*	www.ncbi.nlm.nih.gov/nuccore/
NCBI	www.ncbi.nlm.nih.gov/portal* www.nlm.nih.gov/core/* .nlm.nih.gov/* www.ncbi.nlm.nih.gov/gtr/tests/* www.ncbi.nlm.nih.gov/core/* www.ncbi.nlm.nih.gov/project/*	www.ncbi.nlm.nih.gov/nuccore/
OMIM	omim.org/* omim.org/entry/* omim.org/static/* omim.org/search/* api.europe.omim.org/api/*	https://omim.org
Panelapp	https://panelapp.genomicsengland.co.uk/	https://panelapp.genomicsengland.co.uk/
Pubmed	static.pubmed.gov/* www.ncbi.nlm.nih.gov/pubmed/* dev-static.pubmed.gov/*	www.ncbi.nlm.nih.gov/pubmed/
The Human Gene Mutation Database	www.hgmd.cf.ac.uk/ac/* www.hgmd.cf.ac.uk/*	www.hgmd.cf.ac.uk

You can request for websites to be whitelisted within the RE by contacting the Genomics England Service Desk. Please be aware that we will not whitelist websites that may put the security of the RE at risk.