Small variant workflow changelog

2.0

26 April 2023 (date of last commit)

• workflow re-written from WDL/Cromwell to Nextflow DSL1
• renamed to Small Variant workflow
• added configuration for both RE (Helix/HPC) and CloudRE (CloudOS)
• implemented dynamic memory/cpus for merge and annotation steps
• updated bcftools to 1.17

1.7

11 Mar 2022 (date of last commit)

• Containerised all process programs
• Updated VEP version from 99 to 105
• Added CI/CD structure

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Last update: November 20, 2023